Package name: [(1S,2R,3R,4R,5R,6R)-3-[[(2R)-2,3-di(butanoyloxy)propoxy]-oxidanidyl-phosphoryl]oxy-2,4,5,6-tetrakis(oxidanyl)cyclohexyl] phosphate

Package ID: 667
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:05:32
Modified at 2016-09-03 23:05:32

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:05:32 | Modified at 2016-09-03 23:05:32 | [download zip]
Type Description Hash (SHA1)
Topology 5P5-ion-1.itp fab2d9b27f15ae7037e923f2b6fab5aa8cec16f9
Structure 5P5-ion-1.pdb bb133824ac54b6529aa4fd36b4fd554028dd8aa6

Compound details

Ligand code 5P5
Molecule identifier 34707FC393E313CD
Displayed name [(1S,2R,3R,4R,5R,6R)-3-[[(2R)-2,3-di(butanoyloxy)propoxy]-oxidanidyl-phosphoryl]oxy-2,4,5,6-tetrakis(oxidanyl)cyclohexyl] phosphate
Canonical IUPAC name [(1S,2R,3R,4R,5R,6R)-3-[[(2R)-2,3-di(butanoyloxy)propoxy]-oxidanidyl-phosphoryl]oxy-2,4,5,6-tetrakis(oxidanyl)cyclohexyl] phosphate
Formula C17H29O16P2
Molecular weight 551.35
Charge -3
Number of atoms 64
SMILES [C@H]1(O[P]([O-])(=O)[O-])[C@H](O)[C@@H](O)[C@H]([C@@H](O[P](OC[C@@H](COC(=O)CCC)OC(=O)CCC)(=O)[O-])[C@@H]1O)O
PubChem CID 86289909
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)