Package name: (4R)-4-[(3R,5S,7R,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid

Package ID: 1683
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:07:49
Modified at 2016-09-03 23:07:49

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:07:49 | Modified at 2016-10-29 12:07:07 | [download zip]
Type Description Hash (SHA1)
Topology JN3-neutral.itp 82bc1c2f4210030ae9be3da6f5d00f731a9280da
Structure JN3-neutral.pdb ace30c3b6684ef0f28e544a46a316d45d327a24b

Compound details

Ligand code JN3
Molecule identifier B3CCAA8A56ED0BDE
Displayed name (4R)-4-[(3R,5S,7R,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid
Canonical IUPAC name (4R)-4-[(3R,5S,7R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid
Formula C24H40O4
Molecular weight 392.58
Charge 0
Number of atoms 68
SMILES C(=O)(O)CC[C@@H](C)[C@H]3CC[C@H]4[C@@H]2[C@H](O)C[C@@H]1C[C@H](O)CC[C@]1(C)[C@H]2CC[C@]34C
PubChem CID 10133
CAS RN 474-25-9
Other names (4R)-4-[(3R,5S,7R,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid • (4R)-4-[(3R,5S,7R,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]valeric acid • 474-25-9 • Anthropodesoxycholic acid • Anthropododesoxycholic acid • CCRIS 2195 • Chendol • Chenic acid • C02528 • Chenodeoxycholic acid • Chenodiol • Cholan-24-oic acid, 3,7-dihydroxy-, (3-alpha,5-beta,7-alpha)- (9CI) • Cholan-24-oic acid, 3,7-dihydroxy-, (3alpha,5beta,7alpha)- • EINECS 207-481-8 • Gallodesoxycholic acid • NSC 657949 • LMST04010032 • AIDS-045143 • AIDS045143 • Cholan-24-oic acid, 3,7-dihydroxy-, (3-.alpha., 5-.beta., 7-.alpha.)- • Chenix • Chenodesoxycholsaeure [German] • Prestwick1_000285 • Chenodiol [USAN] • JN3 • SMP1_000064 • Prestwick3_000285 • SBB002935 • CDCA • CHEBI:16755 • SPBio_002409 • HSCI1_000210 • Chenix (TN) • Chenodeoxycholic acid (JP15/INN) • Chenodiol (USAN) • D00163 • (3alpha,5beta,7alpha,8xi)-3,7-dihydroxycholan-24-oic acid • BPBio1_000210 • Prestwick0_000285 • Prestwick2_000285 • Spectrum5_002009 • BSPBio_000190 • 7alpha-hydroxylithocholic acid • 3-alpha,7-alpha-Dihydroxy-5-beta-cholan-24-oic acid • 3-alpha,7-alpha-Dihydroxycholanic acid • 3-alpha,7-alpha-Dihydroxycholansaeure [German] • 3alpha,7alpha-Dihydroxy-5beta-cholan-24-oic acid • 5-beta-Cholan-24-oic acid, 3-alpha,7-alpha-dihydroxy- • 7-alpha-Hydroxylithocholic acid • Acide chenodeoxycholique [INN-French] • Acido chenodeoxicholico [INN-Spanish] • Acidum chenodeoxycholicum [INN-Latin] • Anthropodeoxycholic acid

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)