Package name: (1s,2r,3r,4s,5r,6s)-2-(alpha-l-allopyranosyloxy)-3,4,5-trihydroxy-6-({6-o-[(1r)-1-hydroxyhexadecyl]-beta-l-gulopyranosyl}oxy)cyclohexyl (2r)-2-{[(1s)-1-hydroxyhexadecyl]oxy}-3-{[(1s,10s)-1-hydroxy-10-methyloctadecyl]oxy}propyl hydrogen (r)-phosphate

Package ID: 2638
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:10:08
Modified at 2016-09-03 23:10:08

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:10:08 | Modified at 2016-09-03 23:10:08 | [download zip]
Type Description Hash (SHA1)
Topology Z69-ion-1.itp 2fd1699905de2774d22afd4c796da72a57c6fd4f
Structure Z69-ion-1.pdb b4fd2c1426b608ff46f56b7c2614fb9b9a7388a1

Compound details

Ligand code Z69
Molecule identifier 5D8932C4549247E9
Displayed name (1s,2r,3r,4s,5r,6s)-2-(alpha-l-allopyranosyloxy)-3,4,5-trihydroxy-6-({6-o-[(1r)-1-hydroxyhexadecyl]-beta-l-gulopyranosyl}oxy)cyclohexyl (2r)-2-{[(1s)-1-hydroxyhexadecyl]oxy}-3-{[(1s,10s)-1-hydroxy-10-methyloctadecyl]oxy}propyl hydrogen (r)-phosphate
Canonical IUPAC name
Formula C72H140O24P
Molecular weight 1420.86
Charge -1
Number of atoms 237
SMILES O([C@H]2[C@H](O[C@@H]1O[C@@H](CO)[C@H](O)[C@H](O)[C@@H]1O)[C@H](O)[C@H](O)[C@@H](O)[C@@H]2O[C@H]3O[C@H]([C@@H](O)[C@H](O)[C@@H]3O)CO[C@@H](O)CCCCCCCCCCCCCCC)[P](=O)([O-])OC[C@H](O[C@H](O)CCCCCCCCCCCCCCC)CO[C@H](O)CCCCCCCC[C@@H](C)CCCCCCCC
PubChem CID —
CAS RN —
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)