Package name: 5-[1-[3-(1-azacyclotridec-1-yl)propyl]-4-[3-nitro-4,5-bis(oxidanyl)phenyl]pyrrol-3-yl]-3-nitro-benzene-1,2-diol

Package ID: 2930
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2017-12-21 08:23:39
Modified at 2017-12-21 08:23:39

Abstract

OPLS-AA parameterization of compound ICSN3250 was carried out using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

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Version 1 created at 2017-12-21

Score N/A

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2017-12-21 08:23:39 | Modified at 2017-12-21 08:23:39 | [download zip]
Type Description Hash (SHA1)
Topology ICSN3250.itp d62ffde4d89d3c70eaaf5d817db18f44f9a144d3
Structure ICSN3250.pdb 1941ae5a21dd516d52327cd11f55abbd6b29d33e

Compound details

Ligand code UNL
Molecule identifier ICSN3250
Displayed name 5-[1-[3-(1-azacyclotridec-1-yl)propyl]-4-[3-nitro-4,5-bis(oxidanyl)phenyl]pyrrol-3-yl]-3-nitro-benzene-1,2-diol
Canonical IUPAC name 5-[1-[3-(1-azacyclotridec-1-yl)propyl]-4-[3-nitro-4,5-bis(oxidanyl)phenyl]pyrrol-3-yl]-3-nitro-benzene-1,2-diol
Formula C31H39N4O8
Molecular weight 595.67
Charge -1
Number of atoms 82
SMILES [O-]C1=C(C=C(C2=CN(C=C2C3=CC(O)=C(C(N(=O)=O)=C3)[O-])CCC[NH+]4CCCCCCCCCCCC4)C=C1N(=O)=O)O
PubChem CID 73602840
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF