Package name: [(3S,8S,9S,10R,13R,14S,17R)-10,13-dimethyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] (Z)-octadec-9-enoate

Package ID: 509
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:05:11
Modified at 2016-09-03 23:05:11

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:05:11 | Modified at 2016-09-03 23:05:11 | [download zip]
Type Description Hash (SHA1)
Topology 2OB.itp ce02b2e7824cb88e44546eb684315c899cb6efd8
Structure 2OB.pdb 1bdd2fa4a8a78d3832543a2111388e1c55172d2c

Compound details

Ligand code 2OB
Molecule identifier 9773EB2CB013CC69
Displayed name [(3S,8S,9S,10R,13R,14S,17R)-10,13-dimethyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] (Z)-octadec-9-enoate
Canonical IUPAC name [(3S,8S,9S,10R,13R,14S,17R)-10,13-dimethyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] (Z)-octadec-9-enoate
Formula C45H78O2
Molecular weight 651.11
Charge 0
Number of atoms 125
SMILES C(=O)(O[C@H]4CC[C@]1(C(=CC[C@@H]2[C@@H]1CC[C@]3(C)[C@H](CC[C@@H]23)[C@H](C)CCCC(C)C)C4)C)CCCCCCC\C=C/CCCCCCCC
PubChem CID 5283632
CAS RN 303-43-5
Other names [(3S,8S,9S,10R,13R,14S,17R)-10,13-dimethyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] (Z)-octadec-9-enoate • [(3S,8S,9S,10R,13R,14S,17R)-17-[(1R)-1,5-dimethylhexyl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] (Z)-octadec-9-enoate • (Z)-octadec-9-enoic acid [(3S,8S,9S,10R,13R,14S,17R)-17-[(1R)-1,5-dimethylhexyl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] ester • 303-43-5 • 18:1 Cholesteryl ester • LMST01020003 • cholest-5-en-3b-yl (9Z-octadecenoate) • Cholest-5-en-3-beta-yl oleate • Cholesteryl cis-9-octadecenoate • C14641 • 3beta-Hydroxy-5-cholestene 3-oleate • 5-Cholesten-3b-ol 3-oleate • 9-octadecenoic acid, (3beta)-cholest-5-en-3-yl ester, (9Z)- • Cholest-5-en-3-ol (3beta)-, (9Z)-9-octadecenoate (9CI) • Cholest-5-en-3-ol (3beta)-, 9-octadecenoate, (Z)- • Cholest-5-en-3-ol (3beta)-, 9-octadecenoate-9,10-t2, (Z)- (9CI) • Cholesterol 3beta-oleate • Cholesterol, oleate (6CI,8CI) • Cholesteryl [9,10-3H]oleate • Cholesteryl oleate-9,10-3H • Cholesteryl oleate-9,10-t2 • Cholesteryl oleic ester • 2OB • Oleic acid, cholesteryl ester (6CI) • (3beta)-cholest-5-en-3-ol, (Z)-9-octadecenoate • (3beta)-cholest-5-en-3-yl (9Z)-octadec-9-enoate • CHEBI:46898 • cholest-5-en-3-yl (9Z)-9-octadecenoate • Oleic acid cholesteryl ester • Cholesteryl oleate • 5-Cholesten-3beta-ol 3-oleate • C9253_SIGMA

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)