Package name: [(2R)-2-butanoyloxy-3-[oxidanyl-[(1S,2R,3R,4S,5S,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate

Package ID: 597
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:05:22
Modified at 2016-09-03 23:05:22

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:05:22 | Modified at 2016-09-03 23:05:22 | [download zip]
Type Description Hash (SHA1)
Topology 3PT-ion-1.itp 9029253dc1045adaf5c549c2262dddf1a0a4d2d1
Structure 3PT-ion-1.pdb 7448989c307fd30a42f83bf832654405c8d9f9c6

Compound details

Ligand code 3PT
Molecule identifier E2F5A255664D06A7
Displayed name [(2R)-2-butanoyloxy-3-[oxidanyl-[(1S,2R,3R,4S,5S,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate
Canonical IUPAC name [(2R)-2-butanoyloxy-3-[oxidanyl-[(1S,2R,3R,4S,5S,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate
Formula C17H28O19P3
Molecular weight 629.32
Charge -5
Number of atoms 67
SMILES [C@H]1(O[P]([O-])(=O)[O-])[C@H](O)[C@H]([C@H](O[P](OC[C@@H](COC(=O)CCC)OC(=O)CCC)([O-])=O)[C@@H]([C@@H]1O[P](=O)([O-])[O-])O)O
PubChem CID 60138181
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)