Package name: (2r)-3-{[(s)-{[(2s,3r,5s,6s)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}-2-(1-hydroxybutoxy)propyl butyrate

Package ID: 652
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:05:29
Modified at 2016-09-03 23:05:29

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:05:29 | Modified at 2016-09-03 23:05:29 | [download zip]
Type Description Hash (SHA1)
Topology 4PT-ion-1.itp f718549ee9b5319c6e07c30843129865895f5ce4
Structure 4PT-ion-1.pdb 0c43d31eef9025459e9e348d68598c60ec36a0be

Compound details

Ligand code 4PT
Molecule identifier 802F1A4C0E9286CA
Displayed name (2r)-3-{[(s)-{[(2s,3r,5s,6s)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}-2-(1-hydroxybutoxy)propyl butyrate
Canonical IUPAC name
Formula C17H29O22P4
Molecular weight 709.30
Charge -7
Number of atoms 72
SMILES [C@@H]1(O[P]([O-])(=O)[O-])[C@@H](O[P](=O)([O-])[O-])[C@H](O[P](=O)([O-])[O-])[C@H]([C@H](O[P](OC[C@@H](COC(=O)CCC)O[C@H](O)CCC)(=O)[O-])[C@@H]1O)O
PubChem CID
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)