Package name: 2-[(2R,3S,4aR,5aS,10aR,11R,11aS)-3-(methoxymethoxy)-11-oxidanyl-2,3,4,4a,5a,6,9,10a,11,11a-decahydropyrano[4,5]pyrano[2,4-b]oxepin-2-yl]ethanoic acid

Package ID: 735
Force-field: OPLS-AA | Code: Gromacs
Created by Bogdan Iorga (biorga)
Created at 2016-09-03 23:05:42
Modified at 2016-09-03 23:05:42

Abstract

The topology was generated using MOL2FF.

Chemical structure

General view

Detailed view

References

No citations associated with these parameters.

Reference validation values

These are experimental values or high-level quantum mechanics values, which will be used for comparison with computed values (found in individual versions).

Files and history

All deposited versions are available and can be downloaded individually. Higher version numbers are more recent. Files that changed between versions can be identified by differing SHA1 hash checksums.

Version 1 created at 2016-09-03

Score 1/5 "These parameters are not validated yet"

Computed validation values

grompp
preprocessor output "grompp-compatible"
Created at 2016-09-03 23:05:42 | Modified at 2016-09-03 23:05:42 | [download zip]
Type Description Hash (SHA1)
Topology AB0-ion-1.itp 258a8623a18fc6ea4f93ad73e9b42e4c1315692a
Structure AB0-ion-1.pdb c2e86eefe42087123f3113daad33155b6cc96207

Compound details

Ligand code AB0
Molecule identifier 612E262817A62D73
Displayed name 2-[(2R,3S,4aR,5aS,10aR,11R,11aS)-3-(methoxymethoxy)-11-oxidanyl-2,3,4,4a,5a,6,9,10a,11,11a-decahydropyrano[4,5]pyrano[2,4-b]oxepin-2-yl]ethanoic acid
Canonical IUPAC name 2-[(2R,3S,4aR,5aS,10aR,11R,11aS)-3-(methoxymethoxy)-11-oxidanyl-2,3,4,4a,5a,6,9,10a,11,11a-decahydropyrano[4,5]pyrano[2,4-b]oxepin-2-yl]ethanoic acid
Formula C16H23O8
Molecular weight 343.35
Charge -1
Number of atoms 47
SMILES C(C(=O)[O-])[C@@H]3[C@@H](OCOC)C[C@@H]2[C@H]([C@H](O)[C@H]1OCC=CC[C@@H]1O2)O3
PubChem CID 49866598
CAS RN
Other names

License

Type CC BY-SA – Creative Commons Attribution-Share Alike License
Name Bogdan I. Iorga
Email (hidden)
Source MOL2FF (http://mol2ff.icsn.cnrs-gif.fr)